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Accession information: Vol. 8; Issue 8; 21 April 2006 Abstract
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FMRP protein partners in mammalian cells
Barbara Bardoni, Laetitia Davidovic, Mounia Bensaid and Edouard W. Khandjian
| Table 1. FMRP protein partners in mammalian cellsa | ||||
| Interactors | Main cell localisation |
RNA-binding? |
Role | Ref. |
| Detected by yeast two-hybrid selection | ||||
| FXR1P | Cytoplasm | + | Translation regulation? | 101 |
| FXR2P | Cytoplasm | + | Translation regulation? | 16 |
| 82-FIP | Cell-cycle-dependent localisation: cytoplasmic/nuclear | + | mRNA transport? | 48 |
| NUFIP | Nucleus and neuronal somatodendritic granules | + | Links transcription to mRNA export? | 102 |
| CYFIP1, CYFIP2 | Cytoplasm | - | Cytoskeleton remodelling through Rho/Rac GTPase pathway | 53 |
| Ran-BPM | Nucleocytoplasmic | - | Nuclear trafficking, cell migration, regulation of transcriptional activity of steroid receptors | 51 |
| MSP58 | Nucleocytoplasmic | + | Nucleolar transcription factor? RNP biogenesis? Translation regulation? | 49 |
| Detected by co-immunoprecipitation | ||||
| C23/Nucleolin | Nucleolus and cytoplasm | + | Chromatin structure, ribosome biogenesis (DNA transcription, rRNA maturation, ribosome assembly) and nucleocytoplasmic shuttling | 103 |
| YB-1/p50 | Cytoplasm | + | Transcription factor, storage of repressed localised mRNAs in germ cells, translation regulator | 104 |
| mStaufen | Cytoplasm | + | Delivery of RNA to dendrites, transport of neuronal RNA granules, storage of repressed localised mRNAs in germ cells | 50 |
| Pur-a | Predominantly nuclear but also present in the somatodendritic compartment of neurons | + | DNA replication, gene transcription, dendritic mRNA transport and translation | 50 |
| Myosin Va | Neuronal somatodendritic compartment | - | Actin-based processive motor protein; transport of synaptic vesicles; regulation of vesicle exocytosis | 50 |
|
a
Direct interaction between FMRP and specific proteins has been documented
using the power of the yeast two-hybrid selection method; other approaches
such as co-immunoprecipitation allow detection of proteins that are associated
with the ribonucleoprotein complexes but not a priori in direct contact
with FMRP. Immunoprecipitation is a powerful tool to study proteins that
are complexed to the targeted protein, and associated proteins are interpreted
as reflecting the in vivo interactions. However, it has been shown that
RNA-binding proteins might possibly re-associate with other components
after cell lysis as a result of interaction of molecules in the cell extract,
and so interactions identified by immunoprecipitation might not reflect
the bone fide in vivo state of complexes (Ref. 105). |
||||
| References cited
in Table 1
16 Zhang, Y. et al. (1995) The fragile X mental retardation syndrome protein interacts with novel homologs FXR1 and FXR2. Embo J 14, 5358-5366, PubMed 48 Bardoni, B. et al. (2003) 82-FIP, a novel FMRP (fragile X mental retardation protein) interacting protein, shows a cell cycle-dependent intracellular localization. Hum Mol Genet 12, 1689-1698, PubMed 49 Davidovic, L. et al. (2006) The nuclear microspherule protein 58 is a novel RNA-binding protein that interacts with fragile X mental retardation protein in polyribosomal mRNPs from neurons. Hum Mol Genet, PubMed [Epub ahead of print] 50 Ohashi, S. et al. (2002) Identification of mRNA/protein (mRNP) complexes containing Puralpha, mStaufen, fragile X protein, and myosin Va and their association with rough endoplasmic reticulum equipped with a kinesin motor. J Biol Chem 277, 37804-37810, PubMed 51 Menon, R.P., Gibson, T.J. and Pastore, A. (2004) The C terminus of fragile X mental retardation protein interacts with the multi-domain Ran-binding protein in the microtubule-organising centre. J Mol Biol 343, 43-53, PubMed 53 Schenck, A. et al. (2001) A highly conserved protein family interacting with the fragile X mental retardation protein (FMRP) and displaying selective interactions with FMRP-related proteins FXR1P and FXR2P. Proc Natl Acad Sci U S A 98, 8844-8849, PubMed 101 Siomi, M.C. et al. (1995) FXR1, an autosomal homolog of the fragile X mental retardation gene. Embo J 14, 2401-2408, PubMed 102 Bardoni, B., Schenck, A. and Mandel, J.L. (1999) A novel RNA-binding nuclear protein that interacts with the fragile X mental retardation (FMR1) protein. Hum Mol Genet 8, 2557-2566, PubMed 103 Ceman, S., Brown, V. and Warren, S.T. (1999) Isolation of an FMRP-associated messenger ribonucleoprotein particle and identification of nucleolin and the fragile X-related proteins as components of the complex. Mol Cell Biol 19, 7925-7932, PubMed 104 Ceman, S., Nelson, R. and Warren, S.T. (2000) Identification of mouse YB1/p50 as a component of the FMRP-associated mRNP particle. Biochem Biophys Res Commun 279, 904-908, PubMed 105 Mili, S. and Steitz, J.A. (2004) Evidence for reassociation of RNA-binding proteins after cell lysis: implications for the interpretation of immunoprecipitation analyses. Rna 10, 1692-1694, PubMed |
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